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Edward Nirenberg @enirenberg.bsky.social

Pfizer also has data on experienced vs. naive, but for them the LP.8.1 vaccine generally outperforms the KP.2 vaccine independent of naive vs. experienced. Interestingly, in naive mice, 2 doses of LP.8.1 also give better neutralization of KP.2 than 2 doses of KP.2. www.fda.gov/media/186597...

GMFRs for mice receiving LP.8.1 relative to KP.2 mRNA vaccine following 2 doses of ancestral, 1 dose of BA.5 bivalent, and then the KP.2 or LP.8.1 vaccine. KP.2 has an advantage for LF.7 and KP.2 (but it's slight- 0.8 and 0.9 GMFR respectively) For XEC, LP.8.1, LP.8.1.1, NB.1.8.1, and XFG, LP.8.1 has the advantage (GMFRs 3.1, 2.8, 3.7, 1.8, and 2.5 respectively) In immunologically naive mice 2 doses of LP.8.1 outperform 2 doses of KP.2 for every variant in the panel with GMFRs for KP.2, LP.8.1, LP.8.1.1, LF.7, NB.1.8.1, and XFG being 3.7, 7.7, 2.6, 2.1, 2.7, and 2.0 respectively.
may 22, 2025, 1:17 pm • 10 1

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Theo Sonobe @theosonobe.bsky.social

Blah. Meant to say, I really hope for LP.8.1 Was hoping for more options (like NB or XFG), but I get why this year, the risk:benefit ratio of being cutting edge didn’t seem worth it to the manufacturers It’s weird to go from “man I hope they select NB/XFG and not LP” to “pls update from KP.2”

may 22, 2025, 6:47 pm • 1 0 • view
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Edward Nirenberg @enirenberg.bsky.social

NB and XFG aren't really on the table. Really the options that are feasible are KP.2, JN.1, and LP.8.1. In this particular case, they are so close together antigenically that the differences are not that important, but given the totality of evidence I would go with LP.8.1

may 22, 2025, 6:49 pm • 0 0 • view
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Theo Sonobe @theosonobe.bsky.social

Obviously, I wish I could pick from a dropdown menu and DIY it lol Data from pan studies showed how it’s probably best to vax with distant versions — to get naive B cells and ideally breadth as a result Idk. I’m way too deep in this stuff. I wish I could get my nasal vaccine and move on

may 22, 2025, 6:55 pm • 0 0 • view
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Theo Sonobe @theosonobe.bsky.social

I agree. However, I usually find myself going back to the “well, if there’s such little difference, then how did these variants manage to dominate to the degree they did” Obv more than S matters, but tbh it just makes me think those extra few mutations might really matter going forward

may 22, 2025, 6:52 pm • 0 0 • view
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Edward Nirenberg @enirenberg.bsky.social

mutations outside S matter, but a big part of it is still timing. As antibodies contract, people again become susceptible to infection and that could catapult whatever variant happens to be around to dominate even if it has minimal evolutionary advantage over the others

may 22, 2025, 6:55 pm • 0 0 • view
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Theo Sonobe @theosonobe.bsky.social

You know what, you’re definitely right. I think it’s harder to tell myself that and believe it vs hearing it directly from a trusted authority on the subject (you) Maybe I should put deference on the studies that compare the variants? Idk. Industry sponsoring usually adds to my lack of finality

may 22, 2025, 6:58 pm • 0 0 • view
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Theo Sonobe @theosonobe.bsky.social

The 3 company’s presentations remind me of last years — where I was left feeling like Pfizer’s data was the best (collected, presented, and summary efficacy) And freaking praying they’d choose KP.2. Was so annoyed initially. V glad they ended up doing the right thing and allowing KP.2

may 22, 2025, 6:45 pm • 1 0 • view
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Edward Nirenberg @enirenberg.bsky.social

Then we have Novavax's data. For their mice which got a JN.1 vaccine primary series, it's hard to see much difference between JN.1, KP.3.1.1, and LP.8.1. The undetectable neutralization of KP.2 despite high titers against JN.1 seems implausible for primary series. www.fda.gov/media/186596...

For mice receiving a primary series of JN.1 vaccine from Novavax and then boosted with either XEC, KP.3.1.1, or LP.8.1, there is minimal difference in the neutralizing antibody titers for all variants in the JN.1 lineage. JN.1 lineage vaccines (JN.1 and LP.8.1) give strong responses against JN.1 derived spikes by pseudovirus neutralization but are poor at inducing responses against older Omicron variants BA.2 and XBB.1.5 in mice primed with JN.1 vaccine In mice subject to primary vaccination, XBB.1.5 vaccine gave good responses against XBB.1.5 and HV.1, but was poor at JN.1 lineages. The JN.1 primary series gave good responses for JN.1 lineages but poor for XBB.1.5 lineages. LP.8.1 vaccine primary series failed to induce a detectable response to XBB.1.5 lineages but gave strong responses to JN.1 lineages except for KP.2, which was undetectable.
may 22, 2025, 1:17 pm • 9 1 • view
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Matt Frieman @mattfrieman.bsky.social

Is ND, No data or not detected?

may 22, 2025, 1:33 pm • 0 0 • view
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Edward Nirenberg @enirenberg.bsky.social

I'm not positive because they don't say but I'm pretty sure it's not detected. Can't think of a reason they wouldn't have data for KP.2 here.

may 22, 2025, 1:35 pm • 0 0 • view
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Scooby Shakespeare @scoobyshakespeare.bsky.social

They just said it's "Not Determined" "Mice have a limited amount of sera... so we only evaluate the most recent and relevant variants"

may 22, 2025, 6:20 pm • 1 0 • view
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Edward Nirenberg @enirenberg.bsky.social

Thank you- that makes more sense. I paused to wait out the public comment period

may 22, 2025, 6:21 pm • 2 0 • view
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Edward Nirenberg @enirenberg.bsky.social

These differences in the vaccine-experienced mice are probably due to differences in their primary series before the updated vaccine booster. With Pfizer and Moderna, I would lean towards LP.8.1 because of the superiority among naive mice. Novavax's data are... weird.

may 22, 2025, 1:17 pm • 12 1 • view
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Allison @allisonc99.bsky.social

For a non scientist but science interested person— can you translate this into everyday speak?

may 22, 2025, 7:13 pm • 0 0 • view
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Edward Nirenberg @enirenberg.bsky.social

The manufacturers tested vaccines based on the spike proteins of a bunch of circulating variants to see which ones gave the best responses in mice. The mice either had no prior COVID-19 vaccines or were given a series of COVID-19 vaccines to try to model the effect of pre-existing immunity.

may 22, 2025, 7:18 pm • 4 0 • view
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Edward Nirenberg @enirenberg.bsky.social

Based on their data, all of the variants tested did improve immune responses to the variants currently circulating by a meaningful amount. There is some variation in comparing the responses to specific variants within the same group of mice, but this could be because of differences in how...

may 22, 2025, 7:18 pm • 3 0 • view
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Edward Nirenberg @enirenberg.bsky.social

the mice were initially vaccinated against COVID-19 (e.g., Moderna did the bivalent, then XBB1.5, and then the updated vaccine; Pfizer did 2 ancestral, the bivalent, and then the updated vaccine). All the options look good. The LP.8.1 variant is the one that is currently dominant and...

may 22, 2025, 7:18 pm • 4 0 • view
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Edward Nirenberg @enirenberg.bsky.social

in most of the data looks very similar to KP.2 and JN.1 vaccines, though there is a slight advantage. That means that we potentially do not need to update the vaccines we already have, unless the FDA decides to recommend that we use an LP.8.1 vaccine. The manufacturers have indicated...

may 22, 2025, 7:18 pm • 5 1 • view
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Edward Nirenberg @enirenberg.bsky.social

that they all should be ready to go with an LP.8.1 vaccine for the summer if that is what ends up being chosen.

may 22, 2025, 7:18 pm • 5 1 • view
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Allison @allisonc99.bsky.social

Thank you! What was weird about the Novavax data?

may 22, 2025, 7:20 pm • 1 0 • view
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Edward Nirenberg @enirenberg.bsky.social

The KP.2 variant and the JN.1 variant are very similar, and in their data they showed no evidence of an antibody response against KP.2 despite a solid one against JN.1. These differ from one another very minimally so the result didn't make sense. They labeled it "ND" on their slides...

may 22, 2025, 7:22 pm • 1 1 • view
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Edward Nirenberg @enirenberg.bsky.social

Update (h/t @scoobyshakespeare.bsky.social)- The NDs here are "not determined," not "not detected," because the mice have limited serum so you can only do so many neutralization assays.

may 22, 2025, 6:22 pm • 6 1 • view
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Theo Sonobe @theosonobe.bsky.social

Wow. Maybe they should’ve found a different abbreviation than ND for these lool I obviously skimmed the 3 presentations so I didn’t closely examine, but I immediately thought “not detected” — which made all the data seem strange. Appreciate you covering this!

may 22, 2025, 6:43 pm • 0 0 • view
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Edward Nirenberg @enirenberg.bsky.social

They updated their presentation to clarify what ND means but the updated version was not published on the VRBPAC meeting site

may 22, 2025, 6:43 pm • 0 1 • view