Thank you for your comments and thoughts! In the paper we tested whether the MusD will respond to enhancers at 3 other developmental loci and it does! So we don’t think it is related to Fgf8 landscape but rather the MusD promoter itself
Thank you for your comments and thoughts! In the paper we tested whether the MusD will respond to enhancers at 3 other developmental loci and it does! So we don’t think it is related to Fgf8 landscape but rather the MusD promoter itself
Also, in Bl6 mice, the MusD is methylated and silenced despite being inserted at the same position (figure 1 and reported previously in Kano et al.)- this is caused by a polymorphism between mouse strains (what exactly is still under investigation 😉)
Quite possible - but the repression could still be Polycomb-mediated, especially since you notice that the MusD demethylation is constitutive there. And many developmental loci have Polycomb marks that spread widely from the target gene itself.